Carnation DB

Dca3392.1

Annotation

5-exons
f-1
sp|Q5JBR7_IPOBA#Peroxiredoxin#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0016491#1F0P0C
Repeat List (scaffold112)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3392.1	1	198	198	72.72	198	73	5e-84
Target_name	Start	End	Length	Cov(%)
sp\|Q5JBR7_IPOBA	1	193	193	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3392.1	1	198	198	70.2	198	71	1e-78
Target_name	Start	End	Length	Cov(%)
Os01t0266600-02	1	198	199	99.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold112	Augus-PASA	mRNA	258478	261751	.	+	.	ID=Dca3392.1;Parent=Dca3392
scaffold112	Augus-PASA	exon	258478	258684	.	+	.	ID=Dca3392.1.exon1;Parent=Dca3392.1
scaffold112	Augus-PASA	exon	258832	258861	.	+	.	ID=Dca3392.1.exon2;Parent=Dca3392.1
scaffold112	Augus-PASA	exon	260205	260363	.	+	.	ID=Dca3392.1.exon3;Parent=Dca3392.1
scaffold112	Augus-PASA	exon	260672	260766	.	+	.	ID=Dca3392.1.exon4;Parent=Dca3392.1
scaffold112	Augus-PASA	exon	261646	261751	.	+	.	ID=Dca3392.1.exon5;Parent=Dca3392.1