Dca3393.1
Annotation
- 4-exons
- f-1
- sp|B9RTX2_RICCO#Short chain dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0913590#GO:0004316;GO:0000166#2F0P0C
- Repeat List (scaffold112)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3393.1 |
5 |
293 |
293 |
67.23 |
289 |
69 |
5e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RTX2_RICCO |
7 |
295 |
295 |
97.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3393.1 |
8 |
293 |
293 |
63.13 |
286 |
65 |
3e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05260.1 |
5 |
289 |
289 |
98.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold112 |
Augustus |
mRNA |
269261 |
271568 |
. |
+ |
. |
ID=Dca3393.1;Parent=Dca3393 |
| scaffold112 |
Augustus |
exon |
269261 |
269383 |
. |
+ |
. |
ID=Dca3393.1.exon1;Parent=Dca3393.1 |
| scaffold112 |
Augustus |
exon |
269980 |
270356 |
. |
+ |
. |
ID=Dca3393.1.exon2;Parent=Dca3393.1 |
| scaffold112 |
Augustus |
exon |
270432 |
270790 |
. |
+ |
. |
ID=Dca3393.1.exon3;Parent=Dca3393.1 |
| scaffold112 |
Augustus |
exon |
271546 |
271568 |
. |
+ |
. |
ID=Dca3393.1.exon4;Parent=Dca3393.1 |
