Carnation DB

Dca33972.1

Annotation

6-exons
f-1
sp|F2DDK5_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0005643;GO:0017056;GO:0006913#1F1P1C
Os06t0305200-01 Nucleoporin, non-repetitive/WGA-negative domain containing protein.
Repeat List (scaffold3489)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33972.1	121	406	409	31.05	286	43	8e-56
Target_name	Start	End	Length	Cov(%)
sp\|F2DDK5_HORVD	1102	1395	1463	20.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33972.1	121	406	409	30.07	286	41	5e-56
Target_name	Start	End	Length	Cov(%)
Os06t0305200-01	1115	1408	1476	19.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3489	Augustus	mRNA	10165	15089	.	+	.	ID=Dca33972.1;Parent=Dca33972
scaffold3489	Augustus	exon	10165	10380	.	+	.	ID=Dca33972.1.exon1;Parent=Dca33972.1
scaffold3489	Augustus	exon	10564	10738	.	+	.	ID=Dca33972.1.exon2;Parent=Dca33972.1
scaffold3489	Augustus	exon	13965	14034	.	+	.	ID=Dca33972.1.exon3;Parent=Dca33972.1
scaffold3489	Augustus	exon	14142	14451	.	+	.	ID=Dca33972.1.exon4;Parent=Dca33972.1
scaffold3489	Augustus	exon	14559	14780	.	+	.	ID=Dca33972.1.exon5;Parent=Dca33972.1
scaffold3489	Augustus	exon	14853	15089	.	+	.	ID=Dca33972.1.exon6;Parent=Dca33972.1