Carnation DB

Dca33999.1

Annotation

6-exons
f-1
sp|B9S2M8_RICCO#Shwachman-Bodian-Diamond syndrome protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0559400#GO:0042254#0F1P0C
Repeat List (scaffold3490)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33999.1	56	142	242	31.81	87	89	1e-39
Target_name	Start	End	Length	Cov(%)
sp\|B9S2M8_RICCO	46	132	356	24.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33999.1	56	142	242	30.99	87	87	6e-40
Target_name	Start	End	Length	Cov(%)
AT1G43860.1	46	132	370	23.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3490	Augustus	mRNA	11158	14272	.	-	.	ID=Dca33999.1;Parent=Dca33999
scaffold3490	Augustus	exon	11158	11262	.	-	.	ID=Dca33999.1.exon1;Parent=Dca33999.1
scaffold3490	Augustus	exon	11435	11631	.	-	.	ID=Dca33999.1.exon2;Parent=Dca33999.1
scaffold3490	Augustus	exon	12315	12447	.	-	.	ID=Dca33999.1.exon3;Parent=Dca33999.1
scaffold3490	Augus-PASA	exon	12560	12689	.	-	.	ID=Dca33999.1.exon4;Parent=Dca33999.1
scaffold3490	Augustus	exon	14018	14169	.	-	.	ID=Dca33999.1.exon5;Parent=Dca33999.1
scaffold3490	Augustus	exon	14261	14272	.	-	.	ID=Dca33999.1.exon6;Parent=Dca33999.1