Dca3400.1
Annotation
- 4-exons
- f-1
- sp|B9HFZ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_869308#GO:0005525;GO:0000917#1F1P0C
- sp|B9SH28_RICCO#GTP-binding protein engB, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0581560#GO:0005525;GO:0000917#1F1P0C
- Repeat List (scaffold1120)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3400.1 |
1 |
297 |
298 |
72.14 |
297 |
70 |
2e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HFZ3_POPTR |
2 |
301 |
302 |
99.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3400.1 |
55 |
297 |
298 |
64.76 |
243 |
80 |
1e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G22870.1 |
57 |
299 |
300 |
81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1120 |
Augustus |
mRNA |
23913 |
25310 |
. |
- |
. |
ID=Dca3400.1;Parent=Dca3400 |
| scaffold1120 |
Augustus |
exon |
23913 |
24122 |
. |
- |
. |
ID=Dca3400.1.exon1;Parent=Dca3400.1 |
| scaffold1120 |
Augustus |
exon |
24235 |
24397 |
. |
- |
. |
ID=Dca3400.1.exon2;Parent=Dca3400.1 |
| scaffold1120 |
Augustus |
exon |
24691 |
24760 |
. |
- |
. |
ID=Dca3400.1.exon3;Parent=Dca3400.1 |
| scaffold1120 |
Augustus |
exon |
24857 |
25310 |
. |
- |
. |
ID=Dca3400.1.exon4;Parent=Dca3400.1 |
