Carnation DB

Dca3402.1

Annotation

7-exons
f-1
sp|B9IBM8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_571999#unknown#0F0P0C
sp|A5BWD1_VITVI#Type II peroxiredoxin 1#Vitis vinifera (Grape)#ORFNames=VITISV_040398#GO:0004601;GO:0051920#2F0P0C
Repeat List (scaffold1120)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3402.1	66	254	254	62.2	189	84	9e-95
Target_name	Start	End	Length	Cov(%)
sp\|B9IBM8_POPTR	11	199	199	94.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3402.1	57	254	254	58.26	198	75	1e-88
Target_name	Start	End	Length	Cov(%)
AT5G65840.1	78	275	275	72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1120	Augus-PASA	mRNA	37996	42222	.	+	.	ID=Dca3402.1;Parent=Dca3402
scaffold1120	Augus-PASA	exon	37996	38277	.	+	.	ID=Dca3402.1.exon1;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	39061	39107	.	+	.	ID=Dca3402.1.exon2;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	39205	39319	.	+	.	ID=Dca3402.1.exon3;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	41341	41385	.	+	.	ID=Dca3402.1.exon4;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	41468	41527	.	+	.	ID=Dca3402.1.exon5;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	41607	41702	.	+	.	ID=Dca3402.1.exon6;Parent=Dca3402.1
scaffold1120	Augus-PASA	exon	42103	42222	.	+	.	ID=Dca3402.1.exon7;Parent=Dca3402.1