Carnation DB

Dca34227.1

Annotation

7-exons
f-1
sp|F6GV03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04940#GO:0003677;GO:0006355#1F1P0C
Os03t0274300-01 Similar to Initiator-binding protein.
Repeat List (scaffold352)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34227.1	2	349	350	61.14	348	59	1e-108
Target_name	Start	End	Length	Cov(%)
sp\|F6GV03_VITVI	332	695	696	52.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34227.1	2	344	350	51.14	343	51	7e-88
Target_name	Start	End	Length	Cov(%)
Os03t0274300-01	335	682	693	50.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold352	Augus-PASA	mRNA	29086	30948	.	-	.	ID=Dca34227.1;Parent=Dca34227
scaffold352	Augus-PASA	exon	29086	29247	.	-	.	ID=Dca34227.1.exon1;Parent=Dca34227.1
scaffold352	Augus-PASA	exon	29395	29458	.	-	.	ID=Dca34227.1.exon2;Parent=Dca34227.1
scaffold352	Augustus	exon	29721	30041	.	-	.	ID=Dca34227.1.exon3;Parent=Dca34227.1
scaffold352	Augustus	exon	30168	30409	.	-	.	ID=Dca34227.1.exon4;Parent=Dca34227.1
scaffold352	Augustus	exon	30514	30593	.	-	.	ID=Dca34227.1.exon5;Parent=Dca34227.1
scaffold352	Augustus	exon	30688	30750	.	-	.	ID=Dca34227.1.exon6;Parent=Dca34227.1
scaffold352	Augustus	exon	30828	30948	.	-	.	ID=Dca34227.1.exon7;Parent=Dca34227.1