Dca34287.1
Annotation
- 2-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold353)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34287.1 |
1 |
158 |
170 |
57.05 |
158 |
54 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
856 |
1037 |
1064 |
17.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34287.1 |
30 |
134 |
170 |
24.11 |
105 |
40 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
456 |
554 |
1262 |
7.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold353 |
Augustus |
mRNA |
26182 |
26878 |
. |
- |
. |
ID=Dca34287.1;Parent=Dca34287 |
| scaffold353 |
Augustus |
exon |
26182 |
26532 |
. |
- |
. |
ID=Dca34287.1.exon1;Parent=Dca34287.1 |
| scaffold353 |
Augustus |
exon |
26717 |
26878 |
. |
- |
. |
ID=Dca34287.1.exon2;Parent=Dca34287.1 |
