Carnation DB

Dca34373.1

Annotation

5-exons
f-1
sp|B9T4L7_RICCO#AMP dependent CoA ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0246200#GO:0016874;GO:0047077#2F0P0C
Repeat List (scaffold3542)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34373.1	1	563	564	68.26	563	69	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T4L7_RICCO	1	555	557	99.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34373.1	21	563	564	62.76	543	65	0
Target_name	Start	End	Length	Cov(%)
AT3G21240.1	19	554	556	96.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3542	Augus-PASA	mRNA	23918	27621	.	+	.	ID=Dca34373.1;Parent=Dca34373
scaffold3542	Augus-PASA	exon	23918	24979	.	+	.	ID=Dca34373.1.exon1;Parent=Dca34373.1
scaffold3542	Augustus	exon	25350	25548	.	+	.	ID=Dca34373.1.exon2;Parent=Dca34373.1
scaffold3542	Augustus	exon	25761	25974	.	+	.	ID=Dca34373.1.exon3;Parent=Dca34373.1
scaffold3542	Augustus	exon	26796	26898	.	+	.	ID=Dca34373.1.exon4;Parent=Dca34373.1
scaffold3542	Augustus	exon	27505	27621	.	+	.	ID=Dca34373.1.exon5;Parent=Dca34373.1