Dca34472.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q8RVC8_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0049K09.5#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold3556)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34472.1 |
90 |
301 |
688 |
11.33 |
212 |
32 |
7e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
15 |
254 |
1717 |
13.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34472.1 |
389 |
550 |
688 |
7.41 |
162 |
32 |
1e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
45 |
189 |
192 |
75.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3556 |
Augustus |
mRNA |
27245 |
29704 |
. |
- |
. |
ID=Dca34472.1;Parent=Dca34472 |
| scaffold3556 |
Augustus |
exon |
27245 |
28156 |
. |
- |
. |
ID=Dca34472.1.exon1;Parent=Dca34472.1 |
| scaffold3556 |
Augustus |
exon |
28222 |
28470 |
. |
- |
. |
ID=Dca34472.1.exon2;Parent=Dca34472.1 |
| scaffold3556 |
Augustus |
exon |
28691 |
29034 |
. |
- |
. |
ID=Dca34472.1.exon3;Parent=Dca34472.1 |
| scaffold3556 |
Augustus |
exon |
29143 |
29704 |
. |
- |
. |
ID=Dca34472.1.exon4;Parent=Dca34472.1 |
