Carnation DB

Dca34485.1

Annotation

19-exons
f-1
sp|D7TCF0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g01110#unknown#0F0P0C
AT2G06005.1 | Symbols: FIP1 | FRIGIDA interacting protein 1 | chr2:2332583-2336022 FORWARD LENGTH=355
Repeat List (scaffold3558)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34485.1	259	600	609	42.36	342	75	4e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7TCF0_VITVI	1	345	353	97.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34485.1	264	609	609	38.42	346	68	5e-136
Target_name	Start	End	Length	Cov(%)
AT2G06005.1	8	353	355	97.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3558	Augustus	mRNA	22091	32466	.	-	.	ID=Dca34485.1;Parent=Dca34485
scaffold3558	Augustus	exon	22091	22195	.	-	.	ID=Dca34485.1.exon1;Parent=Dca34485.1
scaffold3558	Augustus	exon	22290	22352	.	-	.	ID=Dca34485.1.exon2;Parent=Dca34485.1
scaffold3558	Augustus	exon	22687	22779	.	-	.	ID=Dca34485.1.exon3;Parent=Dca34485.1
scaffold3558	Augustus	exon	23282	23341	.	-	.	ID=Dca34485.1.exon4;Parent=Dca34485.1
scaffold3558	Augustus	exon	23560	23622	.	-	.	ID=Dca34485.1.exon5;Parent=Dca34485.1
scaffold3558	Augustus	exon	23945	24026	.	-	.	ID=Dca34485.1.exon6;Parent=Dca34485.1
scaffold3558	Augustus	exon	24117	24213	.	-	.	ID=Dca34485.1.exon7;Parent=Dca34485.1
scaffold3558	Augustus	exon	24800	24855	.	-	.	ID=Dca34485.1.exon8;Parent=Dca34485.1
scaffold3558	Augus-PASA	exon	25110	25182	.	-	.	ID=Dca34485.1.exon9;Parent=Dca34485.1
scaffold3558	Augus-PASA	exon	26349	26415	.	-	.	ID=Dca34485.1.exon10;Parent=Dca34485.1
scaffold3558	Augus-PASA	exon	26724	26773	.	-	.	ID=Dca34485.1.exon11;Parent=Dca34485.1
scaffold3558	Augus-PASA	exon	27494	27602	.	-	.	ID=Dca34485.1.exon12;Parent=Dca34485.1
scaffold3558	Augus-PASA	exon	28061	28148	.	-	.	ID=Dca34485.1.exon13;Parent=Dca34485.1
scaffold3558	Augustus	exon	30129	30186	.	-	.	ID=Dca34485.1.exon14;Parent=Dca34485.1
scaffold3558	Augustus	exon	31311	31446	.	-	.	ID=Dca34485.1.exon15;Parent=Dca34485.1
scaffold3558	Augustus	exon	31527	31658	.	-	.	ID=Dca34485.1.exon16;Parent=Dca34485.1
scaffold3558	Augustus	exon	31733	31997	.	-	.	ID=Dca34485.1.exon17;Parent=Dca34485.1
scaffold3558	Augustus	exon	32098	32171	.	-	.	ID=Dca34485.1.exon18;Parent=Dca34485.1
scaffold3558	Augustus	exon	32308	32466	.	-	.	ID=Dca34485.1.exon19;Parent=Dca34485.1