Dca3450.1
Annotation
- 4-exons
- f-1
- sp|B9IF22_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_666563#GO:0004197;GO:0006508#1F1P0C
- AT5G50260.1 | Symbols: | Cysteine proteinases superfamily protein | chr5:20455605-20456862 FORWARD LENGTH=361
- Repeat List (scaffold1122)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3450.1 |
1 |
339 |
347 |
62.82 |
339 |
65 |
1e-133
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IF22_POPTR |
15 |
352 |
362 |
93.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3450.1 |
1 |
339 |
347 |
59.94 |
339 |
62 |
1e-129
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G50260.1 |
13 |
350 |
361 |
93.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1122 |
Augustus |
mRNA |
23561 |
25152 |
. |
- |
. |
ID=Dca3450.1;Parent=Dca3450 |
| scaffold1122 |
Augustus |
exon |
23561 |
23818 |
. |
- |
. |
ID=Dca3450.1.exon1;Parent=Dca3450.1 |
| scaffold1122 |
Augustus |
exon |
24108 |
24248 |
. |
- |
. |
ID=Dca3450.1.exon2;Parent=Dca3450.1 |
| scaffold1122 |
Augustus |
exon |
24321 |
24556 |
. |
- |
. |
ID=Dca3450.1.exon3;Parent=Dca3450.1 |
| scaffold1122 |
Augustus |
exon |
24744 |
25152 |
. |
- |
. |
ID=Dca3450.1.exon4;Parent=Dca3450.1 |
