Carnation DB

Dca3452.1

Annotation

5-exons
f-1
sp|B9RAQ4_RICCO#Protein tipD, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507840#GO:0016905#1F0P0C
Repeat List (scaffold1122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3452.1	11	516	516	68.41	506	69	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RAQ4_RICCO	8	520	520	98.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3452.1	11	516	516	63.95	506	66	0
Target_name	Start	End	Length	Cov(%)
AT5G50230.1	4	509	509	99.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1122	Augus-PASA	mRNA	35256	38915	.	-	.	ID=Dca3452.1;Parent=Dca3452
scaffold1122	Augus-PASA	exon	35256	36278	.	-	.	ID=Dca3452.1.exon1;Parent=Dca3452.1
scaffold1122	Augus-PASA	exon	37037	37232	.	-	.	ID=Dca3452.1.exon2;Parent=Dca3452.1
scaffold1122	Augus-PASA	exon	37351	37532	.	-	.	ID=Dca3452.1.exon3;Parent=Dca3452.1
scaffold1122	Augus-PASA	exon	38632	38770	.	-	.	ID=Dca3452.1.exon4;Parent=Dca3452.1
scaffold1122	Augus-PASA	exon	38905	38915	.	-	.	ID=Dca3452.1.exon5;Parent=Dca3452.1