Dca34928.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3609)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34928.1 |
53 |
366 |
415 |
28.43 |
314 |
35 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
47 |
387 |
1501 |
22.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34928.1 |
56 |
212 |
415 |
11.32 |
157 |
30 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
94 |
250 |
296 |
53.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3609 |
Augustus |
mRNA |
30181 |
32022 |
. |
- |
. |
ID=Dca34928.1;Parent=Dca34928 |
| scaffold3609 |
Augustus |
exon |
30181 |
31265 |
. |
- |
. |
ID=Dca34928.1.exon1;Parent=Dca34928.1 |
| scaffold3609 |
Augustus |
exon |
31336 |
31420 |
. |
- |
. |
ID=Dca34928.1.exon2;Parent=Dca34928.1 |
| scaffold3609 |
Augustus |
exon |
31945 |
32022 |
. |
- |
. |
ID=Dca34928.1.exon3;Parent=Dca34928.1 |
