Carnation DB

Dca35004.1

Annotation

12-exons
f-1
sp|F6HYA2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g03510#unknown#0F0P0C
sp|B9GXE7_POPTR#PAF1 complex component#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PAFA902#unknown#0F0P0C
Repeat List (scaffold362)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35004.1	36	638	691	53.4	603	59	3e-172
Target_name	Start	End	Length	Cov(%)
sp\|F6HYA2_VITVI	38	654	702	87.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35004.1	232	684	691	34.44	453	53	4e-125
Target_name	Start	End	Length	Cov(%)
Os08t0157100-01	11	448	452	96.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold362	Augustus	mRNA	64246	68176	.	+	.	ID=Dca35004.1;Parent=Dca35004
scaffold362	Augustus	exon	64246	65132	.	+	.	ID=Dca35004.1.exon1;Parent=Dca35004.1
scaffold362	Augustus	exon	65351	65419	.	+	.	ID=Dca35004.1.exon2;Parent=Dca35004.1
scaffold362	Augustus	exon	65528	65635	.	+	.	ID=Dca35004.1.exon3;Parent=Dca35004.1
scaffold362	Augustus	exon	65800	65980	.	+	.	ID=Dca35004.1.exon4;Parent=Dca35004.1
scaffold362	Augustus	exon	66067	66143	.	+	.	ID=Dca35004.1.exon5;Parent=Dca35004.1
scaffold362	Augustus	exon	66249	66368	.	+	.	ID=Dca35004.1.exon6;Parent=Dca35004.1
scaffold362	Augustus	exon	66748	66853	.	+	.	ID=Dca35004.1.exon7;Parent=Dca35004.1
scaffold362	Augustus	exon	67035	67121	.	+	.	ID=Dca35004.1.exon8;Parent=Dca35004.1
scaffold362	Augustus	exon	67219	67287	.	+	.	ID=Dca35004.1.exon9;Parent=Dca35004.1
scaffold362	Augustus	exon	67385	67456	.	+	.	ID=Dca35004.1.exon10;Parent=Dca35004.1
scaffold362	Augustus	exon	67571	67714	.	+	.	ID=Dca35004.1.exon11;Parent=Dca35004.1
scaffold362	Augustus	exon	68021	68176	.	+	.	ID=Dca35004.1.exon12;Parent=Dca35004.1