Carnation DB

Dca35007.1

Annotation

11-exons
f-1
sp|F6HY96_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g03440#GO:0005524;GO:0004674;GO:0016998#2F1P0C
AT1G51940.1 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr1:19296092-19298941 REVERSE LENGTH=651
Repeat List (scaffold362)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35007.1	2	608	608	69.4	607	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HY96_VITVI	62	666	666	90.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35007.1	2	608	608	62	607	61	0
Target_name	Start	End	Length	Cov(%)
AT1G51940.1	50	651	651	92.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold362	Augus-PASA	mRNA	87816	93349	.	-	.	ID=Dca35007.1;Parent=Dca35007
scaffold362	Augus-PASA	exon	87816	87980	.	-	.	ID=Dca35007.1.exon1;Parent=Dca35007.1
scaffold362	Augus-PASA	exon	88212	88319	.	-	.	ID=Dca35007.1.exon2;Parent=Dca35007.1
scaffold362	Augus-PASA	exon	88544	88688	.	-	.	ID=Dca35007.1.exon3;Parent=Dca35007.1
scaffold362	Augustus	exon	88765	88862	.	-	.	ID=Dca35007.1.exon4;Parent=Dca35007.1
scaffold362	Augustus	exon	88949	89100	.	-	.	ID=Dca35007.1.exon5;Parent=Dca35007.1
scaffold362	Augustus	exon	89721	89817	.	-	.	ID=Dca35007.1.exon6;Parent=Dca35007.1
scaffold362	Augustus	exon	89929	90018	.	-	.	ID=Dca35007.1.exon7;Parent=Dca35007.1
scaffold362	Augustus	exon	90113	90267	.	-	.	ID=Dca35007.1.exon8;Parent=Dca35007.1
scaffold362	Augustus	exon	90382	90684	.	-	.	ID=Dca35007.1.exon9;Parent=Dca35007.1
scaffold362	Augustus	exon	90815	90892	.	-	.	ID=Dca35007.1.exon10;Parent=Dca35007.1
scaffold362	Augustus	exon	92914	93349	.	-	.	ID=Dca35007.1.exon11;Parent=Dca35007.1