Carnation DB

Dca35028.1

Annotation

7-exons
f-1
sp|F2CUW2_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0051287;GO:0050661;GO:0016620;GO:0006006#3F1P0C
AT1G42970.1 | Symbols: GAPB | glyceraldehyde-3-phosphate dehydrogenase B subunit | chr1:16127552-16129584 FORWARD LENGTH=447
Repeat List (scaffold3622)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35028.1	5	304	306	80.71	300	80	1e-135
Target_name	Start	End	Length	Cov(%)
sp\|F2CUW2_HORVD	132	442	444	70.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35028.1	5	304	306	83	300	82	6e-135
Target_name	Start	End	Length	Cov(%)
AT1G42970.1	136	446	447	69.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3622	Augustus	mRNA	2435	4530	.	-	.	ID=Dca35028.1;Parent=Dca35028
scaffold3622	Augustus	exon	2435	2573	.	-	.	ID=Dca35028.1.exon1;Parent=Dca35028.1
scaffold3622	Augustus	exon	3207	3613	.	-	.	ID=Dca35028.1.exon2;Parent=Dca35028.1
scaffold3622	Augustus	exon	3684	3733	.	-	.	ID=Dca35028.1.exon3;Parent=Dca35028.1
scaffold3622	Augustus	exon	3825	3903	.	-	.	ID=Dca35028.1.exon4;Parent=Dca35028.1
scaffold3622	Augustus	exon	4020	4127	.	-	.	ID=Dca35028.1.exon5;Parent=Dca35028.1
scaffold3622	Augustus	exon	4219	4341	.	-	.	ID=Dca35028.1.exon6;Parent=Dca35028.1
scaffold3622	Augustus	exon	4516	4530	.	-	.	ID=Dca35028.1.exon7;Parent=Dca35028.1