Dca35040.1
Annotation
- 3-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3624)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35040.1 |
125 |
225 |
1774 |
2.31 |
101 |
41 |
3e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
4 |
104 |
1788 |
5.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35040.1 |
927 |
1745 |
1774 |
14.48 |
819 |
30 |
3e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
1401 |
1539 |
53.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3624 |
Augustus |
mRNA |
19762 |
25697 |
. |
+ |
. |
ID=Dca35040.1;Parent=Dca35040 |
| scaffold3624 |
Augustus |
exon |
19762 |
20476 |
. |
+ |
. |
ID=Dca35040.1.exon1;Parent=Dca35040.1 |
| scaffold3624 |
Augustus |
exon |
20914 |
24149 |
. |
+ |
. |
ID=Dca35040.1.exon2;Parent=Dca35040.1 |
| scaffold3624 |
Augustus |
exon |
24324 |
25697 |
. |
+ |
. |
ID=Dca35040.1.exon3;Parent=Dca35040.1 |
