Carnation DB

Dca35063.1

Annotation

9-exons
f-1
sp|F6HUS4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01220#GO:0003677#1F0P0C
sp|B9GXG3_POPTR#High mobility group family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HMGB913#GO:0003677#1F0P0C
Repeat List (scaffold3629)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35063.1	1	494	500	62.4	494	61	7e-143
Target_name	Start	End	Length	Cov(%)
sp\|F6HUS4_VITVI	1	497	505	98.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35063.1	323	497	500	11.2	175	32	9e-09
Target_name	Start	End	Length	Cov(%)
AT4G11080.1	158	319	446	36.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3629	Augustus	mRNA	522	3655	.	+	.	ID=Dca35063.1;Parent=Dca35063
scaffold3629	Augustus	exon	522	983	.	+	.	ID=Dca35063.1.exon1;Parent=Dca35063.1
scaffold3629	Augustus	exon	1757	1885	.	+	.	ID=Dca35063.1.exon2;Parent=Dca35063.1
scaffold3629	Augustus	exon	2117	2388	.	+	.	ID=Dca35063.1.exon3;Parent=Dca35063.1
scaffold3629	Augustus	exon	2502	2607	.	+	.	ID=Dca35063.1.exon4;Parent=Dca35063.1
scaffold3629	Augustus	exon	2757	2822	.	+	.	ID=Dca35063.1.exon5;Parent=Dca35063.1
scaffold3629	Augustus	exon	2905	3075	.	+	.	ID=Dca35063.1.exon6;Parent=Dca35063.1
scaffold3629	Augustus	exon	3164	3255	.	+	.	ID=Dca35063.1.exon7;Parent=Dca35063.1
scaffold3629	Augustus	exon	3353	3437	.	+	.	ID=Dca35063.1.exon8;Parent=Dca35063.1
scaffold3629	Augustus	exon	3536	3655	.	+	.	ID=Dca35063.1.exon9;Parent=Dca35063.1