Carnation DB

Dca35145.1

Annotation

7-exons
f-1
sp|B9IDP1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_574729#GO:0003723#1F0P0C
AT5G53060.1 | Symbols: | RNA-binding KH domain-containing protein | chr5:21515355-21518197 FORWARD LENGTH=652
Repeat List (scaffold364)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35145.1	40	465	474	54.64	426	59	7e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9IDP1_POPTR	249	679	685	62.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35145.1	40	465	474	47.89	426	53	4e-112
Target_name	Start	End	Length	Cov(%)
AT5G53060.1	231	646	652	63.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold364	Augustus	mRNA	43803	47105	.	+	.	ID=Dca35145.1;Parent=Dca35145
scaffold364	Augustus	exon	43803	43919	.	+	.	ID=Dca35145.1.exon1;Parent=Dca35145.1
scaffold364	Augustus	exon	44307	44744	.	+	.	ID=Dca35145.1.exon2;Parent=Dca35145.1
scaffold364	Augustus	exon	45137	45382	.	+	.	ID=Dca35145.1.exon3;Parent=Dca35145.1
scaffold364	Augustus	exon	45767	46021	.	+	.	ID=Dca35145.1.exon4;Parent=Dca35145.1
scaffold364	Augustus	exon	46518	46621	.	+	.	ID=Dca35145.1.exon5;Parent=Dca35145.1
scaffold364	Augustus	exon	46751	46859	.	+	.	ID=Dca35145.1.exon6;Parent=Dca35145.1
scaffold364	Augustus	exon	46950	47105	.	+	.	ID=Dca35145.1.exon7;Parent=Dca35145.1