Dca35169.1
Annotation
- 4-exons
- f-1
- sp|Q5GA69_SOLLC#Putative polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
- Repeat List (scaffold3642)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35169.1 |
40 |
119 |
543 |
5.89 |
80 |
40 |
9e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5GA69_SOLLC |
24 |
100 |
687 |
11.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35169.1 |
116 |
541 |
543 |
29.28 |
426 |
36 |
9e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
979 |
1420 |
1428 |
30.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3642 |
Augustus |
mRNA |
15296 |
17693 |
. |
- |
. |
ID=Dca35169.1;Parent=Dca35169 |
| scaffold3642 |
Augustus |
exon |
15296 |
15512 |
. |
- |
. |
ID=Dca35169.1.exon1;Parent=Dca35169.1 |
| scaffold3642 |
Augustus |
exon |
15582 |
16651 |
. |
- |
. |
ID=Dca35169.1.exon2;Parent=Dca35169.1 |
| scaffold3642 |
Augustus |
exon |
17227 |
17452 |
. |
- |
. |
ID=Dca35169.1.exon3;Parent=Dca35169.1 |
| scaffold3642 |
Augustus |
exon |
17575 |
17693 |
. |
- |
. |
ID=Dca35169.1.exon4;Parent=Dca35169.1 |
