Carnation DB

Dca35197.1

Annotation

12-exons
f-1
sp|D7TXM4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0106g00610#GO:0016021;GO:0005215;GO:0055085#1F1P1C
sp|B9SG70_RICCO#Hippocampus abundant transcript 1 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1086240#GO:0016021;GO:0005215;GO:0055085#1F1P1C
Repeat List (scaffold3649)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35197.1	23	437	441	46.25	415	50	8e-104
Target_name	Start	End	Length	Cov(%)
sp\|D7TXM4_VITVI	16	424	435	94.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35197.1	8	429	441	36.73	422	39	6e-76
Target_name	Start	End	Length	Cov(%)
Os11t0151500-01	6	423	448	93.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3649	Augustus	mRNA	14480	17788	.	-	.	ID=Dca35197.1;Parent=Dca35197
scaffold3649	Augustus	exon	14480	14560	.	-	.	ID=Dca35197.1.exon1;Parent=Dca35197.1
scaffold3649	Augustus	exon	14648	14718	.	-	.	ID=Dca35197.1.exon2;Parent=Dca35197.1
scaffold3649	Augustus	exon	14812	14890	.	-	.	ID=Dca35197.1.exon3;Parent=Dca35197.1
scaffold3649	Augustus	exon	14973	15080	.	-	.	ID=Dca35197.1.exon4;Parent=Dca35197.1
scaffold3649	Augustus	exon	15433	15465	.	-	.	ID=Dca35197.1.exon5;Parent=Dca35197.1
scaffold3649	Augustus	exon	15556	15636	.	-	.	ID=Dca35197.1.exon6;Parent=Dca35197.1
scaffold3649	Augustus	exon	15788	15874	.	-	.	ID=Dca35197.1.exon7;Parent=Dca35197.1
scaffold3649	Augustus	exon	16114	16189	.	-	.	ID=Dca35197.1.exon8;Parent=Dca35197.1
scaffold3649	Augustus	exon	16335	16504	.	-	.	ID=Dca35197.1.exon9;Parent=Dca35197.1
scaffold3649	Augustus	exon	16598	16720	.	-	.	ID=Dca35197.1.exon10;Parent=Dca35197.1
scaffold3649	Augustus	exon	16803	17036	.	-	.	ID=Dca35197.1.exon11;Parent=Dca35197.1
scaffold3649	Augustus	exon	17606	17788	.	-	.	ID=Dca35197.1.exon12;Parent=Dca35197.1