Dca35198.1
Annotation
- 2-exons
- f-1
- sp|Q9XIH8_ARATH#Putative non-LTR retrolelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16110#GO:0003964#1F0P0C
- Repeat List (scaffold3649)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35198.1 |
56 |
222 |
236 |
22.03 |
167 |
31 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9XIH8_ARATH |
136 |
303 |
323 |
52.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35198.1 |
45 |
190 |
236 |
19.06 |
146 |
30 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G02520.1 |
12 |
160 |
211 |
70.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3649 |
Augustus |
mRNA |
24664 |
26457 |
. |
- |
. |
ID=Dca35198.1;Parent=Dca35198 |
| scaffold3649 |
Augustus |
exon |
24664 |
25266 |
. |
- |
. |
ID=Dca35198.1.exon1;Parent=Dca35198.1 |
| scaffold3649 |
Augustus |
exon |
26350 |
26457 |
. |
- |
. |
ID=Dca35198.1.exon2;Parent=Dca35198.1 |
