Carnation DB

Dca35199.1

Annotation

5-exons
f-1
sp|B9T7V5_RICCO#Arginine/serine-rich splicing factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0285870#GO:0003676;GO:0000166;GO:0008270#3F0P0C
Repeat List (scaffold3649)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35199.1	1	190	191	72.77	190	73	5e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9T7V5_RICCO	1	183	184	99.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35199.1	1	190	191	64.39	190	65	9e-46
Target_name	Start	End	Length	Cov(%)
Os06t0187900-02	1	179	186	96.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3649	Augus-PASA	mRNA	27392	31126	.	-	.	ID=Dca35199.1;Parent=Dca35199
scaffold3649	Augus-PASA	exon	27392	27398	.	-	.	ID=Dca35199.1.exon1;Parent=Dca35199.1
scaffold3649	Augus-PASA	exon	27824	27973	.	-	.	ID=Dca35199.1.exon2;Parent=Dca35199.1
scaffold3649	Augus-PASA	exon	28186	28426	.	-	.	ID=Dca35199.1.exon3;Parent=Dca35199.1
scaffold3649	Augus-PASA	exon	29172	29260	.	-	.	ID=Dca35199.1.exon4;Parent=Dca35199.1
scaffold3649	Augustus	exon	31038	31126	.	-	.	ID=Dca35199.1.exon5;Parent=Dca35199.1