Carnation DB

Dca3520.1

Annotation

6-exons
f-1
sp|D7TMC5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g03960#unknown#0F0P0C
sp|B9SUQ3_RICCO#Taxilin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0714650#unknown#0F0P0C
Repeat List (scaffold1126)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3520.1	7	146	146	74.65	140	78	2e-56
Target_name	Start	End	Length	Cov(%)
sp\|D7TMC5_VITVI	141	280	418	33.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3520.1	3	146	146	70.54	144	72	4e-51
Target_name	Start	End	Length	Cov(%)
AT5G50840.2	121	264	405	35.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1126	Augustus	mRNA	1	3314	.	-	.	ID=Dca3520.1;Parent=Dca3520
scaffold1126	Augustus	exon	1	42	.	-	.	ID=Dca3520.1.exon1;Parent=Dca3520.1
scaffold1126	Augustus	exon	142	208	.	-	.	ID=Dca3520.1.exon2;Parent=Dca3520.1
scaffold1126	Augustus	exon	687	751	.	-	.	ID=Dca3520.1.exon3;Parent=Dca3520.1
scaffold1126	Augustus	exon	1952	2029	.	-	.	ID=Dca3520.1.exon4;Parent=Dca3520.1
scaffold1126	Augustus	exon	2671	2738	.	-	.	ID=Dca3520.1.exon5;Parent=Dca3520.1
scaffold1126	Augustus	exon	3197	3314	.	-	.	ID=Dca3520.1.exon6;Parent=Dca3520.1