Carnation DB

Dca35279.1

Annotation

5-exons
f-1
sp|F6HQX5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02740#unknown#0F0P0C
AT3G55140.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:20438819-20440225 FORWARD LENGTH=331
Repeat List (scaffold366)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35279.1	4	377	380	71.05	374	73	7e-155
Target_name	Start	End	Length	Cov(%)
sp\|F6HQX5_VITVI	11	371	373	96.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35279.1	49	371	380	61.31	323	73	3e-141
Target_name	Start	End	Length	Cov(%)
AT3G55140.1	1	323	331	97.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold366	Augus-PASA	mRNA	150671	153535	.	-	.	ID=Dca35279.1;Parent=Dca35279
scaffold366	Augus-PASA	exon	150671	150910	.	-	.	ID=Dca35279.1.exon1;Parent=Dca35279.1
scaffold366	Augus-PASA	exon	151316	151384	.	-	.	ID=Dca35279.1.exon2;Parent=Dca35279.1
scaffold366	Augus-PASA	exon	151488	151698	.	-	.	ID=Dca35279.1.exon3;Parent=Dca35279.1
scaffold366	Augus-PASA	exon	152222	152573	.	-	.	ID=Dca35279.1.exon4;Parent=Dca35279.1
scaffold366	Augus-PASA	exon	153265	153535	.	-	.	ID=Dca35279.1.exon5;Parent=Dca35279.1