Dca3529.1
Annotation
- 4-exons
- f-1
- sp|A5AZM9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0080g00440#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- sp|B9RIU9_RICCO#Ribosomal protein S9, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1582880#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold1126)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3529.1 |
1 |
423 |
423 |
53.42 |
423 |
53 |
3e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AZM9_VITVI |
1 |
357 |
357 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3529.1 |
120 |
423 |
423 |
46.09 |
304 |
63 |
8e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G49080.1 |
132 |
430 |
430 |
69.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1126 |
Augus-PASA |
mRNA |
47022 |
50396 |
. |
+ |
. |
ID=Dca3529.1;Parent=Dca3529 |
| scaffold1126 |
Augus-PASA |
exon |
47022 |
47679 |
. |
+ |
. |
ID=Dca3529.1.exon1;Parent=Dca3529.1 |
| scaffold1126 |
Augustus |
exon |
48785 |
49225 |
. |
+ |
. |
ID=Dca3529.1.exon2;Parent=Dca3529.1 |
| scaffold1126 |
Augustus |
exon |
50110 |
50190 |
. |
+ |
. |
ID=Dca3529.1.exon3;Parent=Dca3529.1 |
| scaffold1126 |
Augustus |
exon |
50305 |
50396 |
. |
+ |
. |
ID=Dca3529.1.exon4;Parent=Dca3529.1 |
