Dca35302.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold3664)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35302.1 |
1 |
365 |
436 |
34.86 |
365 |
30 |
4e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
229 |
727 |
1717 |
29.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35302.1 |
209 |
290 |
436 |
5.96 |
82 |
32 |
5e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
175 |
192 |
40.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3664 |
Augustus |
mRNA |
27765 |
30646 |
. |
+ |
. |
ID=Dca35302.1;Parent=Dca35302 |
| scaffold3664 |
Augustus |
exon |
27765 |
28326 |
. |
+ |
. |
ID=Dca35302.1.exon1;Parent=Dca35302.1 |
| scaffold3664 |
Augustus |
exon |
28459 |
28740 |
. |
+ |
. |
ID=Dca35302.1.exon2;Parent=Dca35302.1 |
| scaffold3664 |
Augustus |
exon |
30180 |
30646 |
. |
+ |
. |
ID=Dca35302.1.exon3;Parent=Dca35302.1 |
