Dca35364.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3673)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35364.1 |
12 |
287 |
296 |
47.29 |
276 |
50 |
3e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
212 |
484 |
1038 |
26.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35364.1 |
192 |
275 |
296 |
12.5 |
84 |
44 |
1e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0327700-01 |
1 |
86 |
87 |
98.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3673 |
Augustus |
mRNA |
15560 |
18709 |
. |
- |
. |
ID=Dca35364.1;Parent=Dca35364 |
| scaffold3673 |
Augustus |
exon |
15560 |
15596 |
. |
- |
. |
ID=Dca35364.1.exon1;Parent=Dca35364.1 |
| scaffold3673 |
Augustus |
exon |
17856 |
18709 |
. |
- |
. |
ID=Dca35364.1.exon2;Parent=Dca35364.1 |
