Dca35377.1
Annotation
- 3-exons
- f-460
- sp|A5AKU4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002520#unknown#0F0P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold3676)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35377.1 |
1 |
259 |
263 |
74.14 |
259 |
67 |
1e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AKU4_VITVI |
195 |
476 |
480 |
58.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35377.1 |
1 |
251 |
263 |
32.31 |
251 |
30 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1109 |
1384 |
1401 |
19.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3676 |
Augustus |
mRNA |
11572 |
13403 |
. |
- |
. |
ID=Dca35377.1;Parent=Dca35377 |
| scaffold3676 |
Augustus |
exon |
11572 |
11998 |
. |
- |
. |
ID=Dca35377.1.exon1;Parent=Dca35377.1 |
| scaffold3676 |
Augustus |
exon |
12107 |
12530 |
. |
- |
. |
ID=Dca35377.1.exon2;Parent=Dca35377.1 |
| scaffold3676 |
Augustus |
exon |
13004 |
13403 |
. |
- |
. |
ID=Dca35377.1.exon3;Parent=Dca35377.1 |
