Dca3539.1
Annotation
- 4-exons
- f-173
- sp|B9H204_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817748#GO:0016772#1F0P0C
- Repeat List (scaffold11265)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3539.1 |
62 |
609 |
609 |
61.9 |
548 |
69 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H204_POPTR |
88 |
635 |
635 |
86.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3539.1 |
70 |
609 |
609 |
59.93 |
540 |
68 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0660200-01 |
123 |
662 |
663 |
81.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11265 |
Augustus |
mRNA |
1986 |
6395 |
. |
+ |
. |
ID=Dca3539.1;Parent=Dca3539 |
| scaffold11265 |
Augustus |
exon |
1986 |
3273 |
. |
+ |
. |
ID=Dca3539.1.exon1;Parent=Dca3539.1 |
| scaffold11265 |
Augustus |
exon |
4131 |
4397 |
. |
+ |
. |
ID=Dca3539.1.exon2;Parent=Dca3539.1 |
| scaffold11265 |
Augustus |
exon |
5999 |
6154 |
. |
+ |
. |
ID=Dca3539.1.exon3;Parent=Dca3539.1 |
| scaffold11265 |
Augustus |
exon |
6276 |
6395 |
. |
+ |
. |
ID=Dca3539.1.exon4;Parent=Dca3539.1 |
