Dca35392.1
Annotation
- 4-exons
- f-1
- sp|A5C021_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017696#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold3679)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35392.1 |
250 |
341 |
1092 |
3.29 |
92 |
40 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C021_VITVI |
504 |
593 |
1801 |
4.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35392.1 |
726 |
945 |
1092 |
6.77 |
220 |
34 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
428 |
707 |
30.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3679 |
Augustus |
mRNA |
12156 |
16065 |
. |
+ |
. |
ID=Dca35392.1;Parent=Dca35392 |
| scaffold3679 |
Augustus |
exon |
12156 |
12802 |
. |
+ |
. |
ID=Dca35392.1.exon1;Parent=Dca35392.1 |
| scaffold3679 |
Augustus |
exon |
12865 |
13240 |
. |
+ |
. |
ID=Dca35392.1.exon2;Parent=Dca35392.1 |
| scaffold3679 |
Augustus |
exon |
13527 |
15316 |
. |
+ |
. |
ID=Dca35392.1.exon3;Parent=Dca35392.1 |
| scaffold3679 |
Augustus |
exon |
15600 |
16065 |
. |
+ |
. |
ID=Dca35392.1.exon4;Parent=Dca35392.1 |
