Carnation DB

Dca35399.1

Annotation

5-exons
f-1
sp|A9PG27_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016788;GO:0006629#1F1P0C
AT5G45670.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18528600-18530164 FORWARD LENGTH=362
Repeat List (scaffold368)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35399.1	19	349	350	47.71	331	50	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|A9PG27_POPTR	25	359	359	93.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35399.1	5	350	350	47.14	346	47	9e-85
Target_name	Start	End	Length	Cov(%)
AT5G45670.1	6	362	362	98.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold368	Augus-PASA	mRNA	12577	14219	.	-	.	ID=Dca35399.1;Parent=Dca35399
scaffold368	Augus-PASA	exon	12577	12788	.	-	.	ID=Dca35399.1.exon1;Parent=Dca35399.1
scaffold368	Augus-PASA	exon	12917	13157	.	-	.	ID=Dca35399.1.exon2;Parent=Dca35399.1
scaffold368	Augus-PASA	exon	13279	13518	.	-	.	ID=Dca35399.1.exon3;Parent=Dca35399.1
scaffold368	Augus-PASA	exon	13675	13799	.	-	.	ID=Dca35399.1.exon4;Parent=Dca35399.1
scaffold368	Augustus	exon	13985	14219	.	-	.	ID=Dca35399.1.exon5;Parent=Dca35399.1