Carnation DB

Dca354.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os09t0122300-01 Similar to Zinc knuckle family protein.
Repeat List (scaffold1003)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca354.1	26	642	805	34.78	617	45	9e-127
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	196	750	1717	32.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca354.1	394	486	805	4.22	93	37	1e-10
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1003	Augustus	mRNA	43649	48204	.	+	.	ID=Dca354.1;Parent=Dca354
scaffold1003	Augustus	exon	43649	43707	.	+	.	ID=Dca354.1.exon1;Parent=Dca354.1
scaffold1003	Augustus	exon	43840	45722	.	+	.	ID=Dca354.1.exon2;Parent=Dca354.1
scaffold1003	Augustus	exon	45815	45917	.	+	.	ID=Dca354.1.exon3;Parent=Dca354.1
scaffold1003	Augustus	exon	46445	46532	.	+	.	ID=Dca354.1.exon4;Parent=Dca354.1
scaffold1003	Augustus	exon	47920	48204	.	+	.	ID=Dca354.1.exon5;Parent=Dca354.1