Carnation DB

Dca3553.1

Annotation

7-exons
f-1
sp|G5DXF0_SILLA#Zinc ion binding protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0008270#1F0P0C
Repeat List (scaffold1127)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3553.1	5	312	362	73.75	308	87	2e-158
Target_name	Start	End	Length	Cov(%)
sp\|G5DXF0_SILLA	1	308	308	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3553.1	5	353	362	61.6	349	61	6e-126
Target_name	Start	End	Length	Cov(%)
AT3G54360.1	31	397	405	90.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1127	Augus-PASA	mRNA	91290	94776	.	-	.	ID=Dca3553.1;Parent=Dca3553
scaffold1127	Augus-PASA	exon	91290	91355	.	-	.	ID=Dca3553.1.exon1;Parent=Dca3553.1
scaffold1127	Augus-PASA	exon	91482	91631	.	-	.	ID=Dca3553.1.exon2;Parent=Dca3553.1
scaffold1127	Augus-PASA	exon	92598	92744	.	-	.	ID=Dca3553.1.exon3;Parent=Dca3553.1
scaffold1127	Augus-PASA	exon	92822	92909	.	-	.	ID=Dca3553.1.exon4;Parent=Dca3553.1
scaffold1127	Augus-PASA	exon	93888	94033	.	-	.	ID=Dca3553.1.exon5;Parent=Dca3553.1
scaffold1127	Augus-PASA	exon	94171	94402	.	-	.	ID=Dca3553.1.exon6;Parent=Dca3553.1
scaffold1127	Augustus	exon	94517	94776	.	-	.	ID=Dca3553.1.exon7;Parent=Dca3553.1