Carnation DB

Dca35633.1

Annotation

12-exons
f-1
sp|B9N7B1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_930874#GO:0005524;GO:0030983;GO:0006298#2F1P0C
AT3G24495.1 | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 | chr3:8912418-8918086 REVERSE LENGTH=1109
Repeat List (scaffold371)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35633.1	1	662	678	60.47	662	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N7B1_POPTR	1	670	1107	60.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35633.1	1	662	678	56.34	662	56	0
Target_name	Start	End	Length	Cov(%)
AT3G24495.1	1	670	1109	60.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold371	Augustus	mRNA	119329	124837	.	-	.	ID=Dca35633.1;Parent=Dca35633
scaffold371	Augustus	exon	119329	119663	.	-	.	ID=Dca35633.1.exon1;Parent=Dca35633.1
scaffold371	Augustus	exon	119738	119864	.	-	.	ID=Dca35633.1.exon2;Parent=Dca35633.1
scaffold371	Augustus	exon	119961	120154	.	-	.	ID=Dca35633.1.exon3;Parent=Dca35633.1
scaffold371	Augustus	exon	120470	120517	.	-	.	ID=Dca35633.1.exon4;Parent=Dca35633.1
scaffold371	Augustus	exon	120606	120639	.	-	.	ID=Dca35633.1.exon5;Parent=Dca35633.1
scaffold371	Augustus	exon	120733	120864	.	-	.	ID=Dca35633.1.exon6;Parent=Dca35633.1
scaffold371	Augustus	exon	121391	121483	.	-	.	ID=Dca35633.1.exon7;Parent=Dca35633.1
scaffold371	Augustus	exon	122090	122153	.	-	.	ID=Dca35633.1.exon8;Parent=Dca35633.1
scaffold371	Augustus	exon	122553	122608	.	-	.	ID=Dca35633.1.exon9;Parent=Dca35633.1
scaffold371	Augustus	exon	122727	122822	.	-	.	ID=Dca35633.1.exon10;Parent=Dca35633.1
scaffold371	Augustus	exon	123148	123694	.	-	.	ID=Dca35633.1.exon11;Parent=Dca35633.1
scaffold371	Augus-PASA	exon	124527	124837	.	-	.	ID=Dca35633.1.exon12;Parent=Dca35633.1