Carnation DB

Dca35680.1

Annotation

7-exons
f-1
sp|F6GW76_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g00860#GO:0008270#1F0P0C
AT2G27950.1 | Symbols: | Ring/U-Box superfamily protein | chr2:11899422-11903171 REVERSE LENGTH=839
Repeat List (scaffold372)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35680.1	1	836	837	46.23	836	45	1e-165
Target_name	Start	End	Length	Cov(%)
sp\|F6GW76_VITVI	1	811	812	99.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35680.1	1	836	837	41.09	836	39	1e-131
Target_name	Start	End	Length	Cov(%)
AT2G27950.1	1	838	839	99.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold372	Augus-PASA	mRNA	112573	116811	.	-	.	ID=Dca35680.1;Parent=Dca35680
scaffold372	Augus-PASA	exon	112573	112690	.	-	.	ID=Dca35680.1.exon1;Parent=Dca35680.1
scaffold372	Augus-PASA	exon	112783	112888	.	-	.	ID=Dca35680.1.exon2;Parent=Dca35680.1
scaffold372	Augus-PASA	exon	113014	113179	.	-	.	ID=Dca35680.1.exon3;Parent=Dca35680.1
scaffold372	Augus-PASA	exon	113705	114014	.	-	.	ID=Dca35680.1.exon4;Parent=Dca35680.1
scaffold372	Augustus	exon	114173	115057	.	-	.	ID=Dca35680.1.exon5;Parent=Dca35680.1
scaffold372	Augustus	exon	115364	115482	.	-	.	ID=Dca35680.1.exon6;Parent=Dca35680.1
scaffold372	Augustus	exon	116002	116811	.	-	.	ID=Dca35680.1.exon7;Parent=Dca35680.1