Carnation DB

Dca3575.1

Annotation

5-exons
f-1
sp|B9RRB8_RICCO#12-oxophytodienoate reductase opr, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0712140#GO:0016629;GO:0010181#2F0P0C
Repeat List (scaffold11288)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3575.1	9	398	398	74.87	390	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RRB8_RICCO	2	391	391	99.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3575.1	5	386	398	71.35	382	75	5e-174
Target_name	Start	End	Length	Cov(%)
Os08t0459600-01	8	388	395	96.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11288	Augus-PASA	mRNA	2241	4373	.	+	.	ID=Dca3575.1;Parent=Dca3575
scaffold11288	Augus-PASA	exon	2241	2320	.	+	.	ID=Dca3575.1.exon1;Parent=Dca3575.1
scaffold11288	Augus-PASA	exon	2516	2656	.	+	.	ID=Dca3575.1.exon2;Parent=Dca3575.1
scaffold11288	Augus-PASA	exon	3108	3238	.	+	.	ID=Dca3575.1.exon3;Parent=Dca3575.1
scaffold11288	Augus-PASA	exon	3428	3610	.	+	.	ID=Dca3575.1.exon4;Parent=Dca3575.1
scaffold11288	Augus-PASA	exon	3712	4373	.	+	.	ID=Dca3575.1.exon5;Parent=Dca3575.1