Carnation DB

Dca35774.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold3735)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35774.1	1207	1535	1535	7.81	329	36	6e-55
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	268	596	1114	29.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35774.1	1231	1535	1535	6.57	305	34	6e-43
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	206	504	857	34.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3735	Augustus	mRNA	16982	30771	.	-	.	ID=Dca35774.1;Parent=Dca35774
scaffold3735	Augustus	exon	16982	17944	.	-	.	ID=Dca35774.1.exon1;Parent=Dca35774.1
scaffold3735	Augustus	exon	22676	23767	.	-	.	ID=Dca35774.1.exon2;Parent=Dca35774.1
scaffold3735	Augustus	exon	27999	28507	.	-	.	ID=Dca35774.1.exon3;Parent=Dca35774.1
scaffold3735	Augustus	exon	28622	30116	.	-	.	ID=Dca35774.1.exon4;Parent=Dca35774.1
scaffold3735	Augustus	exon	30223	30771	.	-	.	ID=Dca35774.1.exon5;Parent=Dca35774.1