Dca3582.1
Annotation
- 4-exons
- f-1
- sp|B9RFD6_RICCO#60S ribosomal protein L18, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1433890#GO:0005840;GO:0003723;GO:0003735;GO:0006412#2F1P1C
- Repeat List (scaffold1129)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3582.1 |
29 |
69 |
124 |
24.19 |
41 |
74 |
9e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RFD6_RICCO |
238 |
278 |
403 |
10.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3582.1 |
29 |
69 |
124 |
22.58 |
41 |
69 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05590.1 |
22 |
62 |
187 |
21.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1129 |
Augustus |
mRNA |
32186 |
33990 |
. |
- |
. |
ID=Dca3582.1;Parent=Dca3582 |
| scaffold1129 |
Augustus |
exon |
32186 |
32275 |
. |
- |
. |
ID=Dca3582.1.exon1;Parent=Dca3582.1 |
| scaffold1129 |
Augustus |
exon |
32926 |
33096 |
. |
- |
. |
ID=Dca3582.1.exon2;Parent=Dca3582.1 |
| scaffold1129 |
Augustus |
exon |
33732 |
33811 |
. |
- |
. |
ID=Dca3582.1.exon3;Parent=Dca3582.1 |
| scaffold1129 |
Augustus |
exon |
33957 |
33990 |
. |
- |
. |
ID=Dca3582.1.exon4;Parent=Dca3582.1 |
