Carnation DB

Dca3585.1

Annotation

7-exons
f-1
sp|B9RUD0_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0851830#GO:0016020#0F0P1C
Repeat List (scaffold1129)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3585.1	13	325	326	43.25	313	41	4e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9RUD0_RICCO	78	416	419	80.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3585.1	13	325	326	42.33	313	40	6e-57
Target_name	Start	End	Length	Cov(%)
AT3G28050.1	16	364	367	95.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1129	Augustus	mRNA	46780	49390	.	+	.	ID=Dca3585.1;Parent=Dca3585
scaffold1129	Augustus	exon	46780	46961	.	+	.	ID=Dca3585.1.exon1;Parent=Dca3585.1
scaffold1129	Augustus	exon	47743	47808	.	+	.	ID=Dca3585.1.exon2;Parent=Dca3585.1
scaffold1129	Augustus	exon	48007	48120	.	+	.	ID=Dca3585.1.exon3;Parent=Dca3585.1
scaffold1129	Augustus	exon	48223	48425	.	+	.	ID=Dca3585.1.exon4;Parent=Dca3585.1
scaffold1129	Augustus	exon	48653	48738	.	+	.	ID=Dca3585.1.exon5;Parent=Dca3585.1
scaffold1129	Augustus	exon	48941	49089	.	+	.	ID=Dca3585.1.exon6;Parent=Dca3585.1
scaffold1129	Augustus	exon	49210	49390	.	+	.	ID=Dca3585.1.exon7;Parent=Dca3585.1