Carnation DB

Dca359.1

Annotation

9-exons
f-1
sp|Q84K76_ARATH#Putative uncharacterized protein At1g04830#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At1g04830#GO:0005622;GO:0005097#1F0P1C
AT1G04830.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr1:1358782-1361844 REVERSE LENGTH=459
Repeat List (scaffold1003)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca359.1	11	330	473	36.36	320	53	4e-91
Target_name	Start	End	Length	Cov(%)
sp\|Q84K76_ARATH	4	300	448	66.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca359.1	11	330	473	36.57	320	54	4e-92
Target_name	Start	End	Length	Cov(%)
AT1G04830.2	4	300	459	64.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1003	Augustus	mRNA	105981	112614	.	+	.	ID=Dca359.1;Parent=Dca359
scaffold1003	Augustus	exon	105981	106376	.	+	.	ID=Dca359.1.exon1;Parent=Dca359.1
scaffold1003	Augustus	exon	107206	107298	.	+	.	ID=Dca359.1.exon2;Parent=Dca359.1
scaffold1003	Augustus	exon	107396	107500	.	+	.	ID=Dca359.1.exon3;Parent=Dca359.1
scaffold1003	Augustus	exon	108109	108261	.	+	.	ID=Dca359.1.exon4;Parent=Dca359.1
scaffold1003	Augustus	exon	109119	109217	.	+	.	ID=Dca359.1.exon5;Parent=Dca359.1
scaffold1003	Augustus	exon	109304	109432	.	+	.	ID=Dca359.1.exon6;Parent=Dca359.1
scaffold1003	Augustus	exon	110608	110684	.	+	.	ID=Dca359.1.exon7;Parent=Dca359.1
scaffold1003	Augustus	exon	111191	111307	.	+	.	ID=Dca359.1.exon8;Parent=Dca359.1
scaffold1003	Augustus	exon	112362	112614	.	+	.	ID=Dca359.1.exon9;Parent=Dca359.1