Carnation DB

Dca35913.1

Annotation

8-exons
f-1
sp|D7LWN7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487116#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
AT5G03415.1 | Symbols: DPB, ATDPB | Transcription factor DP | chr5:842842-845200 FORWARD LENGTH=385
Repeat List (scaffold376)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35913.1	18	366	367	65.66	349	67	1e-125
Target_name	Start	End	Length	Cov(%)
sp\|D7LWN7_ARALL	28	388	389	92.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35913.1	18	366	367	64.57	349	63	2e-122
Target_name	Start	End	Length	Cov(%)
AT5G03415.1	24	384	385	93.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold376	Augustus	mRNA	55271	58854	.	+	.	ID=Dca35913.1;Parent=Dca35913
scaffold376	Augustus	exon	55271	55497	.	+	.	ID=Dca35913.1.exon1;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	55700	55779	.	+	.	ID=Dca35913.1.exon2;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	55903	55946	.	+	.	ID=Dca35913.1.exon3;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	57143	57349	.	+	.	ID=Dca35913.1.exon4;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	57444	57512	.	+	.	ID=Dca35913.1.exon5;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	57657	57755	.	+	.	ID=Dca35913.1.exon6;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	58169	58239	.	+	.	ID=Dca35913.1.exon7;Parent=Dca35913.1
scaffold376	Augus-PASA	exon	58548	58854	.	+	.	ID=Dca35913.1.exon8;Parent=Dca35913.1