Carnation DB

Dca36002.1

Annotation

6-exons
f-1
sp|B9H323_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_758970#unknown#0F0P0C
AT1G66880.1 | Symbols: | Protein kinase superfamily protein | chr1:24946928-24955438 FORWARD LENGTH=1296
Repeat List (scaffold3774)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36002.1	179	324	478	11.5	146	38	6e-13
Target_name	Start	End	Length	Cov(%)
sp\|B9H323_POPTR	297	434	451	30.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36002.1	211	394	478	11.92	184	31	3e-15
Target_name	Start	End	Length	Cov(%)
AT1G66880.1	231	397	1296	12.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3774	Augustus	mRNA	31282	36479	.	-	.	ID=Dca36002.1;Parent=Dca36002
scaffold3774	Augustus	exon	31282	32176	.	-	.	ID=Dca36002.1.exon1;Parent=Dca36002.1
scaffold3774	Augustus	exon	34040	34125	.	-	.	ID=Dca36002.1.exon2;Parent=Dca36002.1
scaffold3774	Augustus	exon	34406	34586	.	-	.	ID=Dca36002.1.exon3;Parent=Dca36002.1
scaffold3774	Augustus	exon	35329	35384	.	-	.	ID=Dca36002.1.exon4;Parent=Dca36002.1
scaffold3774	Augustus	exon	36166	36230	.	-	.	ID=Dca36002.1.exon5;Parent=Dca36002.1
scaffold3774	Augustus	exon	36326	36479	.	-	.	ID=Dca36002.1.exon6;Parent=Dca36002.1