Dca36008.1
Annotation
- 2-exons
- f-1
- sp|Q2R3U8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g30700#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3775)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36008.1 |
104 |
288 |
308 |
39.93 |
185 |
64 |
4e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R3U8_ORYSJ |
906 |
1098 |
1099 |
17.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36008.1 |
51 |
248 |
308 |
22.72 |
198 |
34 |
3e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
349 |
553 |
1262 |
16.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3775 |
Augustus |
mRNA |
15238 |
16281 |
. |
- |
. |
ID=Dca36008.1;Parent=Dca36008 |
| scaffold3775 |
Augustus |
exon |
15238 |
15852 |
. |
- |
. |
ID=Dca36008.1.exon1;Parent=Dca36008.1 |
| scaffold3775 |
Augustus |
exon |
15970 |
16281 |
. |
- |
. |
ID=Dca36008.1.exon2;Parent=Dca36008.1 |
