Dca36075.1
Annotation
- 3-exons
- f-1
- sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3782)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36075.1 |
459 |
813 |
813 |
16.85 |
355 |
36 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O22175_ARATH |
718 |
1088 |
1496 |
24.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36075.1 |
711 |
813 |
813 |
6.88 |
103 |
55 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
85 |
187 |
1262 |
8.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3782 |
Augustus |
mRNA |
32662 |
36081 |
. |
+ |
. |
ID=Dca36075.1;Parent=Dca36075 |
| scaffold3782 |
Augustus |
exon |
32662 |
33924 |
. |
+ |
. |
ID=Dca36075.1.exon1;Parent=Dca36075.1 |
| scaffold3782 |
Augustus |
exon |
34206 |
34326 |
. |
+ |
. |
ID=Dca36075.1.exon2;Parent=Dca36075.1 |
| scaffold3782 |
Augustus |
exon |
35024 |
36081 |
. |
+ |
. |
ID=Dca36075.1.exon3;Parent=Dca36075.1 |
