Carnation DB

Dca36100.1

Annotation

25-exons
f-1
sp|D7MDY4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_492569#GO:0005634;GO:0005488;GO:0008233;GO:0006508#2F1P1C
AT4G22970.1 | Symbols: RSW4, AESP, ESP | homolog of separase | chr4:12033703-12043572 REVERSE LENGTH=2180
Repeat List (scaffold3787)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36100.1	9	281	2009	4.38	273	33	3e-25
Target_name	Start	End	Length	Cov(%)
sp\|D7MDY4_ARALL	11	255	2186	11.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36100.1	26	295	2009	4.28	270	32	3e-26
Target_name	Start	End	Length	Cov(%)
AT4G22970.1	24	264	2180	11.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3787	Augustus	mRNA	25757	40076	.	-	.	ID=Dca36100.1;Parent=Dca36100
scaffold3787	Augustus	exon	25757	26274	.	-	.	ID=Dca36100.1.exon1;Parent=Dca36100.1
scaffold3787	Augustus	exon	26639	26726	.	-	.	ID=Dca36100.1.exon2;Parent=Dca36100.1
scaffold3787	Augustus	exon	26824	27060	.	-	.	ID=Dca36100.1.exon3;Parent=Dca36100.1
scaffold3787	Augustus	exon	27547	27940	.	-	.	ID=Dca36100.1.exon4;Parent=Dca36100.1
scaffold3787	Augustus	exon	28036	28270	.	-	.	ID=Dca36100.1.exon5;Parent=Dca36100.1
scaffold3787	Augustus	exon	28354	28583	.	-	.	ID=Dca36100.1.exon6;Parent=Dca36100.1
scaffold3787	Augustus	exon	28677	28732	.	-	.	ID=Dca36100.1.exon7;Parent=Dca36100.1
scaffold3787	Augustus	exon	29271	29459	.	-	.	ID=Dca36100.1.exon8;Parent=Dca36100.1
scaffold3787	Augustus	exon	30612	30714	.	-	.	ID=Dca36100.1.exon9;Parent=Dca36100.1
scaffold3787	Augustus	exon	31097	31322	.	-	.	ID=Dca36100.1.exon10;Parent=Dca36100.1
scaffold3787	Augustus	exon	32058	32612	.	-	.	ID=Dca36100.1.exon11;Parent=Dca36100.1
scaffold3787	Augustus	exon	32715	32838	.	-	.	ID=Dca36100.1.exon12;Parent=Dca36100.1
scaffold3787	Augustus	exon	32946	33203	.	-	.	ID=Dca36100.1.exon13;Parent=Dca36100.1
scaffold3787	Augustus	exon	33667	33756	.	-	.	ID=Dca36100.1.exon14;Parent=Dca36100.1
scaffold3787	Augustus	exon	33857	34225	.	-	.	ID=Dca36100.1.exon15;Parent=Dca36100.1
scaffold3787	Augustus	exon	34332	34475	.	-	.	ID=Dca36100.1.exon16;Parent=Dca36100.1
scaffold3787	Augustus	exon	34558	34668	.	-	.	ID=Dca36100.1.exon17;Parent=Dca36100.1
scaffold3787	Augustus	exon	34763	34978	.	-	.	ID=Dca36100.1.exon18;Parent=Dca36100.1
scaffold3787	Augustus	exon	35083	35208	.	-	.	ID=Dca36100.1.exon19;Parent=Dca36100.1
scaffold3787	Augustus	exon	35297	35590	.	-	.	ID=Dca36100.1.exon20;Parent=Dca36100.1
scaffold3787	Augustus	exon	36200	36334	.	-	.	ID=Dca36100.1.exon21;Parent=Dca36100.1
scaffold3787	Augustus	exon	36471	36564	.	-	.	ID=Dca36100.1.exon22;Parent=Dca36100.1
scaffold3787	Augustus	exon	36920	37284	.	-	.	ID=Dca36100.1.exon23;Parent=Dca36100.1
scaffold3787	Augustus	exon	38150	38324	.	-	.	ID=Dca36100.1.exon24;Parent=Dca36100.1
scaffold3787	Augustus	exon	39379	40076	.	-	.	ID=Dca36100.1.exon25;Parent=Dca36100.1