Dca36118.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold379)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36118.1 |
1 |
271 |
365 |
48.76 |
271 |
65 |
3e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
380 |
653 |
1717 |
15.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36118.1 |
120 |
212 |
365 |
9.58 |
93 |
38 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold379 |
Augustus |
mRNA |
47349 |
48770 |
. |
+ |
. |
ID=Dca36118.1;Parent=Dca36118 |
| scaffold379 |
Augustus |
exon |
47349 |
47594 |
. |
+ |
. |
ID=Dca36118.1.exon1;Parent=Dca36118.1 |
| scaffold379 |
Augustus |
exon |
47678 |
48245 |
. |
+ |
. |
ID=Dca36118.1.exon2;Parent=Dca36118.1 |
| scaffold379 |
Augustus |
exon |
48487 |
48770 |
. |
+ |
. |
ID=Dca36118.1.exon3;Parent=Dca36118.1 |
