Carnation DB

Dca36126.1

Annotation

9-exons
f-1
sp|D7T6V7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g03160#unknown#0F0P0C
sp|B9RSQ1_RICCO#Vacuole membrane protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0677740#unknown#0F0P0C
Repeat List (scaffold379)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36126.1	1	424	517	58.41	424	72	6e-177
Target_name	Start	End	Length	Cov(%)
sp\|D7T6V7_VITVI	1	424	439	96.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36126.1	21	422	517	54.15	402	70	5e-170
Target_name	Start	End	Length	Cov(%)
AT4G14950.1	12	413	416	96.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold379	Augustus	mRNA	162592	172824	.	-	.	ID=Dca36126.1;Parent=Dca36126
scaffold379	Augustus	exon	162592	162867	.	-	.	ID=Dca36126.1.exon1;Parent=Dca36126.1
scaffold379	Augustus	exon	163855	164010	.	-	.	ID=Dca36126.1.exon2;Parent=Dca36126.1
scaffold379	Augus-PASA	exon	164124	164303	.	-	.	ID=Dca36126.1.exon3;Parent=Dca36126.1
scaffold379	Augus-PASA	exon	164425	164541	.	-	.	ID=Dca36126.1.exon4;Parent=Dca36126.1
scaffold379	Augus-PASA	exon	166268	166425	.	-	.	ID=Dca36126.1.exon5;Parent=Dca36126.1
scaffold379	Augus-PASA	exon	168406	168705	.	-	.	ID=Dca36126.1.exon6;Parent=Dca36126.1
scaffold379	Augus-PASA	exon	169143	169221	.	-	.	ID=Dca36126.1.exon7;Parent=Dca36126.1
scaffold379	Augustus	exon	169762	169973	.	-	.	ID=Dca36126.1.exon8;Parent=Dca36126.1
scaffold379	Augustus	exon	172749	172824	.	-	.	ID=Dca36126.1.exon9;Parent=Dca36126.1