Carnation DB

Dca3616.1

Annotation

5-exons
f-1
sp|F6H6R4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0157g00090#GO:0016846;GO:0030170#2F0P0C
AT1G34060.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:12396561-12398299 REVERSE LENGTH=463
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3616.1	9	447	462	51.51	439	54	6e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6H6R4_VITVI	16	447	459	94.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3616.1	9	447	462	49.35	439	52	4e-138
Target_name	Start	End	Length	Cov(%)
AT1G34060.1	11	449	463	94.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	105632	108134	.	+	.	ID=Dca3616.1;Parent=Dca3616
scaffold113	Augustus	exon	105632	105918	.	+	.	ID=Dca3616.1.exon1;Parent=Dca3616.1
scaffold113	Augustus	exon	106018	106312	.	+	.	ID=Dca3616.1.exon2;Parent=Dca3616.1
scaffold113	Augustus	exon	106654	106949	.	+	.	ID=Dca3616.1.exon3;Parent=Dca3616.1
scaffold113	Augustus	exon	107455	107735	.	+	.	ID=Dca3616.1.exon4;Parent=Dca3616.1
scaffold113	Augustus	exon	107905	108134	.	+	.	ID=Dca3616.1.exon5;Parent=Dca3616.1